Noca_2599 protein (Nocardioides sp. JS614) - STRING interaction network

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Score

Noca_2599

Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL. (175 aa)

Predicted Functional Partners:

rplS

0.932

rpmA

0.932

rplP

0.929

rpmJ

0.924

rpsB

0.923

rplO

0.922

rplM

0.918

rpsI

0.916

rpsP

0.916

rnc

0.915

Your Current Organism:

Nocardioides sp. JS614

NCBI taxonomy Id: 196162
Other names: N. sp. JS614

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Noca_2599	rnc	Noca_2599	Noca_3281	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.915
Noca_2599	rplM	Noca_2599	Noca_0889	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.918
Noca_2599	rplO	Noca_2599	Noca_3886	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.922
Noca_2599	rplP	Noca_2599	Noca_3898	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.929
Noca_2599	rplS	Noca_2599	Noca_3255	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.932
Noca_2599	rpmA	Noca_2599	Noca_3450	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.932
Noca_2599	rpmJ	Noca_2599	Noca_3879	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	PFAM: ribosomal protein L36; KEGG: sma:SAV4950 putative ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.924
Noca_2599	rpsB	Noca_2599	Noca_3243	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	PFAM: ribosomal protein S2; KEGG: sco:SCO5624 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.923
Noca_2599	rpsI	Noca_2599	Noca_0890	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	PFAM: ribosomal protein S9; KEGG: pac:PPA1802 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.916
Noca_2599	rpsP	Noca_2599	Noca_3260	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	PFAM: ribosomal protein S16; KEGG: rha:RHA1_ro06535 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.916
rnc	Noca_2599	Noca_3281	Noca_2599	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.	0.915
rnc	rplM	Noca_3281	Noca_0889	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.937
rnc	rplO	Noca_3281	Noca_3886	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.923
rnc	rplP	Noca_3281	Noca_3898	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.924
rnc	rplS	Noca_3281	Noca_3255	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.947
rnc	rpmA	Noca_3281	Noca_3450	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PFAM: ribosomal protein L27; KEGG: sco:SCO2596 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.947
rnc	rpmJ	Noca_3281	Noca_3879	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PFAM: ribosomal protein L36; KEGG: sma:SAV4950 putative ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.911
rnc	rpsB	Noca_3281	Noca_3243	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PFAM: ribosomal protein S2; KEGG: sco:SCO5624 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.937
rnc	rpsI	Noca_3281	Noca_0890	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PFAM: ribosomal protein S9; KEGG: pac:PPA1802 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.944
rnc	rpsP	Noca_3281	Noca_3260	RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PFAM: ribosomal protein S16; KEGG: rha:RHA1_ro06535 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.935