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Noca_2601 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2601" - tRNA/rRNA methyltransferase SpoU in Nocardioides sp. JS614
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2601tRNA/rRNA methyltransferase SpoU (267 aa)    
Predicted Functional Partners:
Noca_2600
uroporphyrinogen-III C-methyltransferase (407 aa)
   
        0.874
Noca_2901
Deoxyribonuclease (413 aa)
   
 
  0.869
Noca_4306
Serine O-acetyltransferase (202 aa)
   
        0.735
Noca_2599
PBP family phospholipid-binding protein (175 aa)
   
        0.679
pheT
phenylalanyl-tRNA synthetase subunit beta (827 aa)
   
   
  0.674
Noca_2017
Ribonuclease II (467 aa)
   
      0.674
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (130 aa)
 
 
  0.673
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (78 aa)
   
      0.619
Noca_2989
30S ribosomal protein S1 (490 aa)
 
      0.589
rplA
50S ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (259 aa)
 
 
  0.584
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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