STRINGSTRING
Noca_2607 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2607" - Galactokinase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2607Galactokinase (399 aa)    
Predicted Functional Partners:
Noca_2454
Aldose 1-epimerase (307 aa)
 
  0.996
Noca_3398
Aldose 1-epimerase (294 aa)
 
  0.996
Noca_4161
UDP-galactose 4-epimerase (334 aa)
 
 
  0.962
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
   
  0.724
Noca_0954
Glycoside hydrolase family protein (831 aa)
 
   
  0.660
Noca_0790
UTP--glucose-1-phosphate uridylyltransferase (461 aa)
   
 
  0.631
Noca_3992
Oxidoreductase domain-containing protein (336 aa)
 
 
  0.627
Noca_4407
SSS family solute/sodium (Na+) symporter (613 aa)
 
 
      0.609
Noca_0379
LacI family transcriptional regulator (342 aa)
 
     
  0.599
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
           
  0.596
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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