STRINGSTRING
Noca_2610 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2610" - Substrate-binding protein LysR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2610Substrate-binding protein LysR (197 aa)    
Predicted Functional Partners:
Noca_2609
Choline/carnitine/betaine transporter (573 aa)
              0.700
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions (323 aa)
     
      0.525
Noca_2611
Oxidoreductase FAD-binding subunit (198 aa)
              0.518
Noca_0471
LacI family transcriptional regulator (339 aa)
   
 
 
  0.499
Noca_2677
AraC family transcriptional regulator (147 aa)
     
   
  0.486
Noca_1825
AraC family transcriptional regulator (344 aa)
     
   
  0.486
Noca_4603
Hypothetical protein (95 aa)
   
          0.474
Noca_3941
Forkhead-associated protein (349 aa)
   
          0.459
Noca_4432
Lysine exporter protein LysE/YggA (200 aa)
         
  0.441
Noca_3621
Hypothetical protein (146 aa)
   
          0.441
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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