Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_26653-aminobutyryl-CoA ammonia-lyase; KEGG: rha:RHA1_ro05324 possible acyl-CoA hydrolase. (133 aa)    
Predicted Functional Partners:
Noca_4226
3-keto-5-aminohexanoate cleavage enzyme; PFAM: protein of unknown function DUF849; KEGG: sth:STH64 hypothetical protein.
  
 0.995
Noca_2664
Beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: cobalamin B12-binding domain protein; KEGG: rfr:Rfer_3887 cobalamin B12-binding.
 
   
 0.959
Noca_2662
KEGG: sth:STH34 Zn-dependent alcohol dehydrogenase and related dehydrogenase.
 
     0.956
Noca_2663
KEGG: sth:STH37 lysine 5,6-aminomutase alpha subunit.
 
   
 0.956
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.921
Noca_1172
PFAM: protein of unknown function DUF849; KEGG: bcn:Bcen_4033 protein of unknown function DUF849.
  
 0.920
Noca_1521
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_5150 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.910
Noca_1813
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV2786 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.910
Noca_2661
L-lysine 2,3-aminomutase; PFAM: Radical SAM domain protein; KEGG: mxa:MXAN_4699 putative L-lysine 2,3-aminomutase.
 
   
 0.903
Noca_4292
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro02304 probable glutaryl-CoA dehydrogenase.
    
 0.902
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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