STRINGSTRING
Noca_2684 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2684" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2684Hypothetical protein (245 aa)    
Predicted Functional Partners:
Noca_2683
Luciferase family protein (298 aa)
              0.840
Noca_2686
Hypothetical protein (145 aa)
 
          0.759
Noca_0159
Hypothetical protein (400 aa)
 
          0.685
Noca_2685
Hypothetical protein (74 aa)
              0.652
Noca_3029
Hypothetical protein (127 aa)
   
          0.566
Noca_1481
methylated-DNA--protein-cysteine methyltransferase (113 aa)
   
          0.546
Noca_0162
SecC motif-containing protein (312 aa)
   
          0.546
Noca_2291
Hypothetical protein (449 aa)
 
          0.534
Noca_2332
Regulatory protein TetR (189 aa)
   
          0.511
Noca_1517
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (107 aa)
   
          0.509
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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