STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2686KEGG: nfa:nfa35130 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Noca_2685
Hypothetical protein.
       0.773
Noca_3628
KEGG: mmc:Mmcs_3027 hypothetical protein.
 
     0.735
Noca_2684
KEGG: rha:RHA1_ro02398 possible membrane protein.
 
     0.631
Noca_2683
PFAM: luciferase family protein; KEGG: nfa:nfa22130 putative monooxygenase.
       0.555
Noca_2687
PFAM: YhhN family protein; KEGG: sma:SAV6447 hypothetical protein.
       0.551
Noca_2688
PFAM: aldo/keto reductase; KEGG: sco:SCO7356 oxidoreductase.
       0.540
Noca_2689
PFAM: alanine racemase domain protein; KEGG: cgb:cg2890 putative amino acid processing enzyme.
       0.540
Noca_2690
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rha:RHA1_ro06901 peptidylprolyl isomerase.
       0.492
Noca_1768
KEGG: nfa:nfa33290 putative transcriptional regulator.
  
     0.443
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.