STRINGSTRING
Noca_2687 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2687" - YhhN family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2687YhhN family protein (223 aa)    
Predicted Functional Partners:
Noca_2689
Alanine racemase domain-containing protein (360 aa)
 
          0.858
Noca_2688
Aldo/keto reductase (278 aa)
              0.840
Noca_2690
Cyclophilin type peptidyl-prolyl cis-trans isomerase (225 aa)
              0.762
Noca_2686
Hypothetical protein (145 aa)
              0.621
Noca_2685
Hypothetical protein (74 aa)
              0.621
Noca_3223
Amidohydrolase 3 (538 aa)
   
          0.518
Noca_2684
Hypothetical protein (245 aa)
              0.482
Noca_2683
Luciferase family protein (298 aa)
              0.473
Noca_2620
Hypothetical protein (413 aa)
   
          0.465
Noca_4047
Hypothetical protein (312 aa)
   
          0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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