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sbcC protein (Nocardioides sp. JS614) - STRING interaction network
"sbcC" - Putative exonuclease in Nocardioides sp. JS614
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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sbcCPutative exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (881 aa)    
Predicted Functional Partners:
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (386 aa)
 
  0.999
Noca_3006
DNA polymerase I (889 aa)
   
  0.951
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (350 aa)
   
  0.863
Noca_2842
5’-3’ exonuclease (289 aa)
 
  0.837
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning (1188 aa)
   
  0.805
Noca_2659
5’-3’ exonuclease (301 aa)
   
  0.798
Noca_0133
DEAD/DEAH box helicase (714 aa)
   
  0.781
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (509 aa)
     
  0.778
Noca_2271
ATP dependent DNA ligase (318 aa)
     
  0.778
Noca_1235
ATP dependent DNA ligase (311 aa)
     
  0.778
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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