STRINGSTRING
Noca_2710 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2710" - Regulatory protein MerR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2710Regulatory protein MerR (198 aa)    
Predicted Functional Partners:
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
       
  0.845
pheT
phenylalanyl-tRNA synthetase subunit beta (827 aa)
 
     
  0.780
Noca_1713
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
   
          0.773
Noca_2911
Hypothetical protein (96 aa)
   
          0.770
Noca_1290
Hypothetical protein (107 aa)
   
          0.769
Noca_1411
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (84 aa)
   
          0.768
Noca_1525
Hypothetical protein (447 aa)
   
          0.763
Noca_3675
Hypothetical protein (209 aa)
   
          0.751
Noca_1888
DNA polymerase III subunit delta (330 aa)
   
          0.750
Noca_4320
Hypothetical protein (119 aa)
   
          0.747
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (7%) [HD]