STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2722PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_4681 protein of unknown function DUF1501. (412 aa)    
Predicted Functional Partners:
Noca_2721
KEGG: mxa:MXAN_6410 hypothetical protein.
 
     0.962
Noca_4568
PFAM: CsbD family protein; KEGG: rha:RHA1_ro04155 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.579
Noca_2719
PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: fra:Francci3_3000 protein of unknown function DUF21.
       0.548
Noca_2720
PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: fal:FRAAL4939 hypothetical protein.
       0.548
Noca_2715
PFAM: protein of unknown function DUF881; KEGG: sco:SCO1385 hypothetical protein.
 
     0.473
Noca_2716
PFAM: protein of unknown function DUF1290; KEGG: sco:SCO1386 integral membrane protein.
       0.404
Noca_2717
PFAM: protein of unknown function DUF881; KEGG: sco:SCO1387 membrane associated protein.
       0.404
Noca_2718
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tfu:Tfu_1393 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.