Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
Noca_2741PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04654 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (293 aa)    
Predicted Functional Partners:
Noca_2781
PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro04531 2-enoyl acyl-CoA hydratase.
 0.960
Noca_4135
PFAM: MaoC domain protein dehydratase; KEGG: sma:SAV6603 hypothetical protein.
 
 0.944
Noca_3534
PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO1698 hypothetical protein.
 
 0.942
Noca_2740
acetyl-CoA acetyltransferase; KEGG: rha:RHA1_ro04678 probable thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.930
Noca_2764
KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.921
Noca_2853
KEGG: tfu:Tfu_1903 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.921
Noca_4120
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04654 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.905
Noca_2742
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04653 short chain dehydrogenase.
 
    
0.839
Noca_2745
KEGG: nfa:nfa5080 putative CoA transferase beta subunit.
 
 
 0.775
Noca_2743
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0516c enoyl-CoA hydratase.
 
 0.769
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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