STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2744PFAM: coenzyme A transferase; KEGG: sma:SAV6202 putative glutaconate CoA-transferase, subunit A. (293 aa)    
Predicted Functional Partners:
Noca_2745
KEGG: nfa:nfa5080 putative CoA transferase beta subunit.
 
 
 0.999
Noca_2746
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4686 2-nitropropane dioxygenase, NPD.
 
  
 0.963
Noca_2743
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0516c enoyl-CoA hydratase.
 
  
 0.950
Noca_1015
KEGG: mmc:Mmcs_1703 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 
 
 0.885
Noca_0331
KEGG: fra:Francci3_2503 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 
 
 0.880
Noca_2742
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04653 short chain dehydrogenase.
 
  
 0.862
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
 
  
 0.802
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
  
 0.801
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
 
  
 0.797
Noca_2769
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4810 putative acyl-CoA dehydrogenase.
 
  
 0.788
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.