STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2767PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro04596 acyl-CoA dehydrogenase. (378 aa)    
Predicted Functional Partners:
Noca_2766
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV6197 putative oxidoreductase.
 
  0.964
Noca_2771
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa4790 putative acyl-CoA dehydrogenase.
     0.930
Noca_2770
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein.
 
     0.889
Noca_2764
KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.876
Noca_2765
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro04598 possible transcriptional regulator.
 
     0.822
Noca_0804
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5189 acyl-CoA dehydrogenase-like protein.
 
     0.821
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
 
 
 0.811
Noca_4128
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: fal:FRAAL3878 putative acyl-CoA dehydrogenase.
 
     0.811
Noca_2787
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4673 MaoC-like dehydratase.
 
 0.802
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
 
 
 0.797
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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