STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2772PFAM: Cupin 2, conserved barrel domain protein; KEGG: sus:Acid_7653 cupin 2, conserved barrel domain protein. (178 aa)    
Predicted Functional Partners:
Noca_2768
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro04595 CoA ligase.
       0.511
Noca_2769
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4810 putative acyl-CoA dehydrogenase.
       0.511
Noca_2770
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein.
       0.511
Noca_2771
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa4790 putative acyl-CoA dehydrogenase.
       0.511
Noca_2124
PFAM: high-affinity nickel-transporter; KEGG: mpa:MAP2924 NicT; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.470
Noca_1601
PFAM: protein of unknown function DUF347; KEGG: fal:FRAAL6358 putative integral membrane protein (partial match).
  
     0.421
Noca_0961
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3938c hypothetical protein.
  
     0.413
Noca_3836
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV5711 hydrolase.
  
     0.402
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.