STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2775PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa4730 putative hydrolase. (302 aa)    
Predicted Functional Partners:
Noca_2774
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro04541 3,4-DHSA dioxygenase.
 
 
 0.994
Noca_2776
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro04539 3-HSA hydroxylase, oxygenase.
 
   0.944
Noca_2768
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro04595 CoA ligase.
   
 0.909
Noca_2779
PFAM: Hydratase/decarboxylase; KEGG: rha:RHA1_ro08085 2-oxopent-4-enoate hydratase.
 
 
 0.818
Noca_2518
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha-hydroxylase, oxygenase.
  
 
 
 0.741
Noca_0207
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.700
Noca_0206
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa33590 hypothetical protein.
 
   0.688
Noca_2773
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rha:RHA1_ro08962 possible oxidoreductase.
 
  
 0.678
Noca_2725
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro04689 fatty-acid--CoA ligase.
 
 
 0.646
Noca_0209
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bur:Bcep18194_B1413 acyl-CoA dehydrogenase-like.
 
   0.633
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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