STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2780PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro04532 3-ketosteroid-delta-1-dehydrogenase. (564 aa)    
Predicted Functional Partners:
Noca_2518
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha-hydroxylase, oxygenase.
 
  
 0.971
Noca_4417
PFAM: nuclear transport factor 2; KEGG: mpa:MAP0541c hypothetical protein.
 
  
 0.953
Noca_0296
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mbo:Mb1848 hypothetical protein.
 
  
 
0.932
Noca_2520
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase.
 
 
 0.931
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
 
 0.928
Noca_2781
PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro04531 2-enoyl acyl-CoA hydratase.
 
    0.904
Noca_2774
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro04541 3,4-DHSA dioxygenase.
 
 
 0.868
Noca_1737
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: sco:SCO5281 putative 2-oxoglutarate dehydrogenase.
  
 
 0.825
Noca_2776
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro04539 3-HSA hydroxylase, oxygenase.
 
 
 0.818
Noca_0207
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.
 
 
 0.812
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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