STRINGSTRING
Noca_2783 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2783" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2783Hypothetical protein (170 aa)    
Predicted Functional Partners:
Noca_2782
Hypothetical protein (400 aa)
              0.840
Noca_2784
Hypothetical protein (269 aa)
              0.656
Noca_4548
Ribonuclease BN (349 aa)
   
          0.629
Noca_1372
Regulatory protein TetR (193 aa)
   
          0.625
Noca_4288
Thioesterase superfamily protein (229 aa)
   
          0.595
Noca_2785
Hypothetical protein (263 aa)
              0.532
Noca_3170
Hypothetical protein (183 aa)
   
          0.510
Noca_3478
Cyclase/dehydrase (160 aa)
   
          0.495
Noca_4152
Hypothetical protein (201 aa)
   
          0.494
Noca_0999
Hypothetical protein (135 aa)
   
          0.485
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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