STRINGSTRING
Noca_2787 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2787" - Dehydratase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2787Dehydratase (126 aa)    
Predicted Functional Partners:
Noca_2789
Hypothetical protein (177 aa)
          0.994
Noca_2788
Hypothetical protein (132 aa)
          0.993
Noca_2786
Lipid-transfer protein (394 aa)
 
          0.971
Noca_2790
acyl-CoA dehydrogenase domain-containing protein (743 aa)
 
          0.946
Noca_2732
Hypothetical protein (319 aa)
 
          0.861
Noca_2517
acyl-CoA dehydrogenase domain-containing protein (395 aa)
 
          0.849
Noca_0940
Hypothetical protein (153 aa)
 
          0.785
Noca_2745
Putative CoA transferase subunit beta (256 aa)
   
          0.778
Noca_2744
Coenzyme A transferase (293 aa)
   
          0.778
Noca_2733
Lipid-transfer protein (355 aa)
   
          0.778
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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