STRINGSTRING
Noca_2801 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2801" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2801Hypothetical protein (73 aa)    
Predicted Functional Partners:
Noca_1471
Integral membrane protein (100 aa)
   
          0.749
Noca_4041
Hypothetical protein (290 aa)
   
          0.721
Noca_2800
TetR family transcriptional regulator (201 aa)
              0.709
Noca_2309
Hypothetical protein (515 aa)
   
          0.659
Noca_3958
Hypothetical protein (118 aa)
   
          0.639
Noca_4403
Hypothetical protein (809 aa)
   
          0.624
Noca_0109
Hypothetical protein (797 aa)
   
          0.562
tatA
Twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (99 aa)
   
          0.518
Noca_0213
Superfamily I DNA and RNA helicase (717 aa)
   
          0.517
Noca_1538
Hypothetical protein (313 aa)
   
          0.509
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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