STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2816PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fal:FRAAL1022 putative thioredoxin reductase. (330 aa)    
Predicted Functional Partners:
Noca_2815
KEGG: mmc:Mmcs_3697 hypothetical protein.
     
 0.789
Noca_2813
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bur:Bcep18194_B1012 short-chain dehydrogenase/reductase SDR.
  
  
 0.784
Noca_2814
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa5340 putative short chain dehydrogenase.
  
  
 0.784
Noca_2812
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: nfa:nfa42140 hypothetical protein.
     
 0.781
Noca_4688
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sma:SAV4306 putative thioredoxin; Belongs to the thioredoxin family.
  
 
 0.770
Noca_0143
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin; Belongs to the thioredoxin family.
  
 
 0.740
Noca_1804
PFAM: Thioredoxin domain; KEGG: sma:SAV2830 putative thioredoxin.
  
 
 0.725
Noca_2817
KEGG: sma:SAV5892 hypothetical protein.
  
 
 0.684
Noca_2818
KEGG: sma:SAV5893 hypothetical protein.
  
 
 0.679
Noca_1474
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sma:SAV3082 molybdopterin biosynthesis protein MoeB.
  
  
 0.662
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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