STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2827PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_0460 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Noca_3152
PFAM: PspA/IM30 family protein; KEGG: sco:SCO2168 putative phage shock protein A.
 
  
 0.811
Noca_3607
PFAM: ATP-binding region, ATPase domain protein domain protein; PspC domain protein; KEGG: sma:SAV3471 two-component system sensor kinase.
 
  
 0.800
Noca_1787
KEGG: tfu:Tfu_2558 hypothetical protein.
  
     0.769
Noca_2457
KEGG: tfu:Tfu_1823 hypothetical protein.
  
     0.738
Noca_1943
Hypothetical protein; KEGG: rha:RHA1_ro10028 possible peptidase.
  
   
 0.629
Noca_4409
KEGG: rha:RHA1_ro02601 hypothetical protein.
  
  
 0.614
Noca_1062
PFAM: protein of unknown function DUF1707; KEGG: sma:SAV5183 hypothetical protein.
  
     0.608
Noca_3106
KEGG: sco:SCO2124 hypothetical protein.
  
     0.594
Noca_0927
KEGG: mpa:MAP3892 hypothetical protein.
  
     0.592
Noca_1800
KEGG: fal:FRAAL2022 hypothetical protein.
  
     0.577
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.