Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_2832Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: rha:RHA1_ro03574 probable cellulose synthase catalytic subunit. (669 aa)    
Predicted Functional Partners:
Noca_2834
KEGG: mmc:Mmcs_0408 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
    0.960
Noca_2833
TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rha:RHA1_ro03575 anti-sigma factor antagonist, possible RsbV; Belongs to the anti-sigma-factor antagonist family.
 
    0.944
Noca_2829
PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rha:RHA1_ro03573 anti-sigma factor, possible RsbU.
 
  
 0.771
Noca_1138
KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.661
Noca_2830
PFAM: phosphoesterase, PA-phosphatase related; KEGG: fal:FRAAL3944 hypothetical membrane protein.
 
   
 0.571
Noca_1977
KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.545
Noca_2831
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: eli:ELI_05015 hypothetical protein.
       0.534
Noca_4224
KEGG: mmc:Mmcs_0947 hypothetical protein.
 
 
 0.501
Noca_2384
KEGG: rha:RHA1_ro05202 hypothetical protein.
  
     0.494
Noca_0371
TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fal:FRAAL6574 anti-sigma-B factor antagonist (anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
 
    0.490
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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