STRINGSTRING
Noca_2833 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2833" - Anti-anti-sigma factor in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2833Anti-anti-sigma factor (111 aa)    
Predicted Functional Partners:
Noca_2832
Cellulose synthase (669 aa)
 
          0.978
Noca_2834
Putative anti-sigma regulatory factor (150 aa)
              0.908
Noca_1695
Stage II sporulation E family protein (346 aa)
 
 
  0.857
Noca_2829
GAF domain-containing protein (393 aa)
 
          0.771
Noca_1923
Stage II sporulation E family protein (511 aa)
   
 
  0.743
Noca_2831
Hemerythrin HHE cation binding domain-containing protein (184 aa)
              0.624
Noca_2830
PA-phosphatase-like phosphoesterase (229 aa)
              0.573
Noca_1393
Sigma-70 region 4 domain-containing protein (260 aa)
 
     
  0.544
Noca_2855
PAS/PAC sensor signal transduction histidine kinase (712 aa)
     
 
  0.484
Noca_4450
Sigma-70 region 4 domain-containing protein (300 aa)
         
  0.479
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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