STRINGSTRING
Noca_2836 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2836" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2836Hypothetical protein (145 aa)    
Predicted Functional Partners:
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (706 aa)
              0.860
Noca_2838
Phospholipase D/transphosphatidylase (419 aa)
              0.652
Noca_2835
Major facilitator transporter (428 aa)
 
          0.610
Noca_2678
Glyoxalase/bleomycin resistance protein/dioxygenase (136 aa)
   
          0.595
Noca_1789
Secreted protein (248 aa)
   
          0.589
Noca_2082
Hypothetical protein (244 aa)
   
          0.550
Noca_2368
Sporulation and cell division protein SsgA (118 aa)
   
          0.475
Noca_4585
Hypothetical protein (330 aa)
   
          0.473
Noca_1298
Hypothetical protein (178 aa)
   
          0.448
Noca_1196
Hypothetical protein (174 aa)
 
          0.441
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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