Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_2860PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_1217 strictosidine synthase. (307 aa)    
Predicted Functional Partners:
Noca_2858
KEGG: sco:SCO2134 hypothetical protein.
 
    0.774
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.730
Noca_2856
DNA primase-like protein; KEGG: sth:STH1795 hypothetical protein.
       0.600
Noca_2857
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: rxy:Rxyl_2013 amino acid permease-associated region; TC 2.A.3.
       0.594
Noca_2861
PFAM: NUDIX hydrolase; KEGG: mpa:MAP2711c hypothetical protein.
 
   
 0.551
Noca_4560
PFAM: Phosphoglycerate mutase; KEGG: mxa:MXAN_5898 hypothetical protein.
 
  
 0.529
Noca_0783
PFAM: Saccharopine dehydrogenase; KEGG: sma:SAV1683 hypothetical protein.
 
     0.451
Noca_2078
PFAM: isochorismatase hydrolase; KEGG: cps:CPS_1616 isochorismatase family protein.
 
    0.446
Noca_3699
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06007 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.444
Noca_3706
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro08645 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
  
 0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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