STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2864PFAM: MMPL domain protein; KEGG: rha:RHA1_ro05027 membrane protein. (715 aa)    
Predicted Functional Partners:
Noca_2866
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2674 ABC transporter ATP-binding protein.
 
     0.491
Noca_2867
PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL5378 putative ABC transport system integral membrane protein.
   
   0.467
Noca_2175
Hypothetical protein; KEGG: fal:FRAAL0176 putative membrane transport protein.
  
   0.456
Noca_2865
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbo:Mb2593 probable glutamine-transport ATP-binding protein ABC transporter GlnQ.
       0.420
Noca_2173
PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro04167 possible transcriptional regulator.
 
  
 0.416
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.