STRINGSTRING
Noca_2866 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2866" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2866ABC transporter-like protein (283 aa)    
Predicted Functional Partners:
Noca_2865
ABC transporter-like protein (218 aa)
 
       
0.900
Noca_3960
Hypothetical protein (845 aa)
 
  0.876
Noca_2867
Hypothetical protein (1027 aa)
              0.868
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (376 aa)
 
   
  0.747
ffh
Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (523 aa)
 
        0.589
Noca_3858
TatD family hydrolase (275 aa)
 
        0.578
Noca_1181
ABC transporter-like protein (270 aa)
 
     
  0.567
lysS
lysyl-tRNA synthetase (516 aa)
 
          0.554
ftsH
Mername-AA223 peptidase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (681 aa)
 
   
  0.541
Noca_0109
Hypothetical protein (797 aa)
   
          0.525
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]