STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2867PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL5378 putative ABC transport system integral membrane protein. (1027 aa)    
Predicted Functional Partners:
Noca_2866
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2674 ABC transporter ATP-binding protein.
 
 
 0.974
Noca_2865
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbo:Mb2593 probable glutamine-transport ATP-binding protein ABC transporter GlnQ.
 
     0.894
Noca_2026
KEGG: fal:FRAAL5813 hypothetical protein.
  
 
 0.763
Noca_0898
KEGG: fra:Francci3_0932 hypothetical protein.
  
     0.698
Noca_3775
PFAM: ABC transporter related; YHS domain protein; SMART: AAA ATPase; TRASH domain protein; KEGG: rpe:RPE_3321 ABC transporter related.
  
 
 0.671
Noca_2675
PFAM: pentapeptide repeat protein.
 
   
 0.654
Noca_3966
PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV4106 hypothetical protein.
 
 
 0.654
Noca_3961
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3089 putative ABC transporter ATP-binding protein.
 
 
 0.639
Noca_0968
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1681 putative ABC transporter, ATP-binding protein.
  
 
 0.584
Noca_1606
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro03122 ABC lipoprotein transporter, ATP-binding component.
  
 
 0.584
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.