STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2890precorrin-6Y C5,15-methyltransferase (decarboxylating); KEGG: tfu:Tfu_0314 SAM (and some other nucleotide) binding motif; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. (398 aa)    
Predicted Functional Partners:
Noca_2893
PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: tfu:Tfu_0317 precorrin-8X methylmutase.
 
 
 0.999
Noca_2881
KEGG: tfu:Tfu_0310 precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK.
 
 
 0.998
Noca_2892
TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tfu:Tfu_0316 precorrin-3B C17-methyltransferase region:precorrin-2 C20-methyltransferase.
 
  
 0.998
Noca_3409
TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tfu:Tfu_0316 precorrin-3B C17-methyltransferase region:precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.998
cobB-2
Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.988
Noca_2878
KEGG: tfu:Tfu_0319 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase.
 
  
 0.981
Noca_3408
TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: nfa:nfa50340 putative methyltransferase; Belongs to the precorrin methyltransferase family.
  
 0.980
Noca_2891
TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: nfa:nfa50340 putative methyltransferase; Belongs to the precorrin methyltransferase family.
  
 0.979
Noca_3410
Hypothetical protein.
  
  
 0.966
Noca_2889
Protoporphyrin IX magnesium-chelatase; KEGG: tfu:Tfu_0313 Mg-chelatase subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
   
 0.956
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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