Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noca_2920 | Noca_2921 | PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:pnf1290 hypothetical protein. | PFAM: protein of unknown function DUF156; KEGG: rha:RHA1_ro03538 hypothetical protein. | 0.774 |
Noca_2920 | Noca_2922 | PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:pnf1290 hypothetical protein. | Copper-translocating P-type ATPase; KEGG: atc:AGR_C_1708 copper-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | 0.567 |
Noca_2921 | Noca_2920 | PFAM: protein of unknown function DUF156; KEGG: rha:RHA1_ro03538 hypothetical protein. | PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:pnf1290 hypothetical protein. | 0.774 |
Noca_2921 | Noca_2922 | PFAM: protein of unknown function DUF156; KEGG: rha:RHA1_ro03538 hypothetical protein. | Copper-translocating P-type ATPase; KEGG: atc:AGR_C_1708 copper-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | 0.754 |
Noca_2922 | Noca_2920 | Copper-translocating P-type ATPase; KEGG: atc:AGR_C_1708 copper-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:pnf1290 hypothetical protein. | 0.567 |
Noca_2922 | Noca_2921 | Copper-translocating P-type ATPase; KEGG: atc:AGR_C_1708 copper-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | PFAM: protein of unknown function DUF156; KEGG: rha:RHA1_ro03538 hypothetical protein. | 0.754 |