STRINGSTRING
Noca_2946 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2946" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2946Hypothetical protein (198 aa)    
Predicted Functional Partners:
Noca_2945
Type I phosphodiesterase/nucleotide pyrophosphatase (372 aa)
 
          0.918
Noca_2948
CoA-binding domain-containing protein (899 aa)
 
          0.826
Noca_1787
Hypothetical protein (255 aa)
   
          0.752
Noca_3198
N-acetyltransferase GCN5 (281 aa)
   
          0.723
Noca_0320
Hypothetical protein (197 aa)
   
          0.701
Noca_3469
Hypothetical protein (126 aa)
   
          0.700
Noca_2947
Hypothetical protein (208 aa)
              0.700
Noca_0374
Methyltransferase small (486 aa)
   
          0.699
Noca_2458
Hypothetical protein (175 aa)
   
          0.698
Noca_1367
Putative ABC transporter (555 aa)
   
          0.697
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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