Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2946KEGG: sco:SCO5843 hypothetical protein. (198 aa)    
Predicted Functional Partners:
Noca_2945
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: tfu:Tfu_2126 hypothetical protein.
 
     0.866
Noca_2458
KEGG: sco:SCO1602 hypothetical protein.
  
     0.740
Noca_3469
KEGG: sma:SAV5453 hypothetical protein.
  
     0.716
Noca_2948
CoA-binding domain protein; PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: tfu:Tfu_2128 hypothetical protein.
 
     0.713
Noca_3198
PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV2560 putative acetyltransferase.
  
     0.710
Noca_0320
KEGG: sma:SAV4558 hypothetical protein.
  
     0.670
Noca_2544
PFAM: ABC-2 type transporter; KEGG: sco:SCO1929 putative integral membrane transport protein.
  
     0.657
Noca_0374
PFAM: methyltransferase small; Methyltransferase type 12; KEGG: sma:SAV4618 rRNA or tRNA methyltransferase; Belongs to the methyltransferase superfamily.
  
     0.642
Noca_2621
KEGG: sma:SAV6637 hypothetical protein.
  
     0.642
Noca_2637
PFAM: peptidase M50; KEGG: tfu:Tfu_1815 hypothetical protein; Belongs to the peptidase M50B family.
  
     0.634
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.