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Noca_2964 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2964" - HhH-GPD family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2964HhH-GPD family protein (188 aa)    
Predicted Functional Partners:
Noca_0907
ATP-dependent DNA ligase (366 aa)
   
          0.704
Noca_2966
Glycosyl transferase family protein (408 aa)
              0.652
Noca_2965
Regulatory protein TetR (192 aa)
              0.652
Noca_0878
Pyridoxamine 5’-phosphate oxidase-like protein (132 aa)
   
          0.616
Noca_3520
Hypothetical protein (314 aa)
   
          0.603
Noca_0179
Hypothetical protein (192 aa)
   
        0.596
Noca_2384
Hypothetical protein (331 aa)
   
          0.584
Noca_4183
HNH endonuclease (434 aa)
   
        0.565
Noca_4159
Hypothetical protein (276 aa)
   
          0.550
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (509 aa)
   
          0.512
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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