STRINGSTRING
Noca_2264 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2264" - Phage integrase family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2264Phage integrase family protein (797 aa)    
Predicted Functional Partners:
Noca_2265
Phage integrase family protein (411 aa)
 
          0.966
Noca_2265
Phage integrase family protein (411 aa)
 
          0.781
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.701
Noca_4117
Extracellular ligand-binding receptor (391 aa)
   
          0.645
Noca_2971
Hypothetical protein (282 aa)
              0.632
Noca_3832
Hypothetical protein (64 aa)
   
          0.586
Noca_3507
Hypothetical protein (93 aa)
   
          0.558
Noca_4652
Transposase, IS111A/IS1328/IS1533 (500 aa)
   
          0.541
Noca_0999
Hypothetical protein (135 aa)
   
          0.483
Noca_1187
Antibiotic biosynthesis monooxygenase (97 aa)
   
          0.462
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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