STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2983Hypothetical protein; KEGG: ade:Adeh_2705 response regulator receiver. (778 aa)    
Predicted Functional Partners:
Noca_3134
PFAM: cytochrome c oxidase, subunit III; KEGG: sco:SCO2151 cytochrome c oxidase subunit III.
    
   0.776
Noca_3135
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.
    
   0.776
Noca_3139
Conserved hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.776
Noca_2982
Hypothetical protein.
       0.631
Noca_1335
PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: mpa:MAP1672 hypothetical protein.
  
   0.621
Noca_3136
PFAM: Rieske [2Fe-2S] domain protein; KEGG: pac:PPA0711 ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
   0.618
Noca_1622
PFAM: cytochrome c oxidase, subunit II; KEGG: tdn:Tmden_0103 putative cytochrome c oxidase subunit II.
   
   0.617
Noca_1623
PFAM: cytochrome c oxidase, subunit I; KEGG: tdn:Tmden_0104 cytochrome c oxidase, subunit I.
   
   0.617
Noca_3140
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
   0.617
Noca_3141
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.617
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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