STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2991KEGG: rha:RHA1_ro05190 hypothetical protein. (320 aa)    
Predicted Functional Partners:
Noca_3001
KEGG: tfu:Tfu_2469 hypothetical protein.
 
   
 0.829
Noca_2998
KEGG: nfa:nfa54700 hypothetical protein.
 
   
 0.808
Noca_2999
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_2465 hypothetical protein.
 
     0.764
Noca_2997
PFAM: acyltransferase 3; KEGG: cef:CE2680 hypothetical protein.
 
   
 0.695
Noca_3002
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05189 possible xylose transporter.
  
     0.679
Noca_3000
PFAM: glycosyl transferase, group 1; KEGG: rha:RHA1_ro05187 possible glycosyl transferase.
 
     0.678
Noca_2996
KEGG: nfa:nfa24300 hypothetical protein.
 
     0.672
Noca_0938
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: sma:SAV3511 secreted protein.
  
     0.625
Noca_3777
PFAM: protein of unknown function DUF214; KEGG: bpm:BURPS1710b_A1034 ABC transporter, permease protein.
  
     0.603
Noca_3186
Hypothetical protein; KEGG: mbo:Mb2137 probable integral membrane protein.
  
     0.559
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.