STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2995PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: pfu:PF1631 NDP-sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (399 aa)    
Predicted Functional Partners:
Noca_2993
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: aba:Acid345_3613 NAD-dependent epimerase/dehydratase.
 
  
 0.963
Noca_2994
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_3351 glycosyl transferase, family 2.
 
  
 0.926
Noca_4220
PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gka:GK3168 pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.785
Noca_1028
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase.
 
  
 0.750
Noca_4210
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pac:PPA0135 aspartate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.727
Noca_4184
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: fal:FRAAL5661 dTDP-glucose 4,6-dehydratase transmembrane protein putative capsular polysaccharide biosynthesis protein.
 
  
 0.627
Noca_2997
PFAM: acyltransferase 3; KEGG: cef:CE2680 hypothetical protein.
  
    0.616
Noca_4211
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: pac:PPA0136 NAD-dependent dehydrogenase.
 
  
 0.553
Noca_2996
KEGG: nfa:nfa24300 hypothetical protein.
       0.534
Noca_4209
KEGG: pac:PPA0134 putative acetyltransferase.
 
  
 0.508
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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