STRINGSTRING
Noca_3003 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3003" - Glycoside hydrolase 15-like protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3003Glycoside hydrolase 15-like protein (602 aa)    
Predicted Functional Partners:
Noca_3994
Alpha,alpha-trehalose-phosphate synthase (482 aa)
 
 
  0.860
Noca_3004
Hypothetical protein (160 aa)
              0.803
Noca_2080
Hypothetical protein (156 aa)
   
          0.778
Noca_3989
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (281 aa)
 
   
  0.679
Noca_3006
DNA polymerase I (889 aa)
   
        0.572
glgE
Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (670 aa)
 
   
  0.567
Noca_3005
Luciferase family protein (338 aa)
              0.563
Noca_0003
6-phosphogluconate dehydrogenase (301 aa)
 
          0.479
Noca_3007
Hypothetical protein (155 aa)
              0.443
Noca_4526
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (482 aa)
   
        0.428
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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