Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3015Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00993 ABC branched-chain amino acid transporter, ATP-binding component; TC 3.A.1.4.-. (327 aa)    
Predicted Functional Partners:
Noca_3014
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1183 branched-chain amino acid transport system permease protein; TC 3.A.1.4.-.
  
 0.967
Noca_3013
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1182 branched-chain amino acid ABC-type transport system permease components; TC 3.A.1.4.-.
 
  
 0.964
Noca_3016
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00994 ABC branched-chain amino acid transport, ATP-binding component; TC 3.A.1.4.-.
 
  
0.889
Noca_3017
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rha:RHA1_ro00995 probable branched-chain amino acid ABC transporter binding protein; TC 3.A.1.4.-.
 
  
 0.855
Noca_1179
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: hma:rrnAC2468 branched chain amino acid transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.830
Noca_1180
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: csa:Csal_1419 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.809
Noca_1183
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bpa:BPP2107 putative ABC transport system, solute-binding protein; TC 3.A.1.4.-.
 
  
 0.768
Noca_4115
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bpa:BPP0593 putative branched-chain amino acid transport system permease protein; TC 3.A.1.4.-.
 
  
 0.759
Noca_4127
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: chy:CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein; TC 3.A.1.4.-.
 
  
 0.759
Noca_4123
PFAM: inner-membrane translocator; KEGG: gsu:GSU1732 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.758
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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