STRINGSTRING
Noca_3038 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3038" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3038Hypothetical protein (169 aa)    
Predicted Functional Partners:
Noca_3036
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (414 aa)
 
          0.973
Noca_3037
DsrC family protein (104 aa)
 
          0.965
Noca_3809
Type III restriction enzyme, res subunit (1033 aa)
       
      0.908
Noca_2932
SirA family protein (77 aa)
 
   
  0.868
Noca_3143
SirA family protein (82 aa)
 
   
  0.642
Noca_1673
Hypothetical protein (211 aa)
 
          0.563
Noca_1474
UBA/THIF-type NAD/FAD binding protein (403 aa)
              0.525
Noca_3035
Hypothetical protein (210 aa)
              0.517
Noca_3947
Helicase domain-containing protein (546 aa)
       
      0.452
Noca_2280
Type III restriction enzyme, res subunit (558 aa)
       
      0.452
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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