STRINGSTRING
Noca_3078 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3078" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3078Hypothetical protein (143 aa)    
Predicted Functional Partners:
Noca_3077
Type 11 methyltransferase (252 aa)
              0.749
Noca_4428
Oxidoreductase (63 aa)
   
          0.645
Noca_0159
Hypothetical protein (400 aa)
   
          0.589
Noca_1464
Hypothetical protein (215 aa)
   
          0.532
Noca_2344
N-acetyltransferase GCN5 (234 aa)
   
          0.526
Noca_2308
Hypothetical protein (86 aa)
   
          0.526
Noca_0213
Superfamily I DNA and RNA helicase (717 aa)
   
          0.499
Noca_3079
Hypothetical protein (149 aa)
              0.493
Noca_2686
Hypothetical protein (145 aa)
   
          0.476
Noca_3076
Hypothetical protein (153 aa)
              0.471
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (7%) [HD]