Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_3082UDP-galactopyranose mutase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sma:SAV6102 phytoene dehydrogenase. (432 aa)    
Predicted Functional Partners:
Noca_3080
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: nfa:nfa28580 hypothetical protein.
       0.730
Noca_3081
PFAM: arsenate reductase and related; KEGG: mxa:MXAN_3126 putative arsenate reductase; Belongs to the ArsC family.
       0.678
Noca_2889
Protoporphyrin IX magnesium-chelatase; KEGG: tfu:Tfu_0313 Mg-chelatase subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
  
 0.669
Noca_3079
Hypothetical protein.
       0.501
Noca_4161
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: pac:PPA0069 UDP-glucose 4-epimerase.
    
  0.500
Noca_3586
Hypothetical protein; KEGG: sma:SAV3318 putative RNA polymerase ECF-subfamily sigma factor.
 
   
 0.477
Noca_0952
KEGG: rha:RHA1_ro05589 probable magnesium chelatase subunit ChlI.
 
  
 0.452
Noca_3077
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sma:SAV6108 methyltransferase.
  
  
 0.450
Noca_3078
KEGG: fra:Francci3_1400 hypothetical protein.
       0.443
Noca_3084
PFAM: Polyprenyl synthetase; KEGG: tfu:Tfu_1051 putative polyprenyl synthase / dimethylallyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
  
 0.440
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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