STRINGSTRING
Noca_3085 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3085" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3085Hypothetical protein (140 aa)    
Predicted Functional Partners:
Noca_3086
Protein kinase (658 aa)
         
  0.790
Noca_1464
Hypothetical protein (215 aa)
   
          0.675
Noca_1406
Hypothetical protein (246 aa)
   
        0.670
Noca_3444
Methionine synthase, vitamin-B12 independent (338 aa)
   
        0.655
Noca_3956
Hypothetical protein (86 aa)
   
          0.643
Noca_4290
ATPase domain-containing protein (315 aa)
   
          0.621
Noca_2368
Sporulation and cell division protein SsgA (118 aa)
   
          0.615
Noca_0284
Signal-transduction protein (68 aa)
   
          0.594
Noca_3198
N-acetyltransferase GCN5 (281 aa)
   
        0.575
Noca_4348
Hypothetical protein (160 aa)
   
          0.575
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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