STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3086PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sco:SCO2110 putative eukaryotic-type serine/threonine protein kinase. (658 aa)    
Predicted Functional Partners:
Noca_2713
PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
 
 
 
 0.981
Noca_0026
PFAM: protein phosphatase 2C domain protein; KEGG: sco:SCO3845 putative protein phosphatase.
 
 0.969
Noca_1982
PFAM: protein phosphatase 2C domain protein; KEGG: cef:CE0037 putative protein phosphatase.
 
 0.969
Noca_3942
PFAM: protein phosphatase 2C domain protein; KEGG: lxx:Lxx12030 protein phosphatase.
 
 
 0.969
Noca_0027
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3061 FHA domain protein.
 
 
 
 0.937
Noca_0028
PFAM: Forkhead-associated protein; KEGG: pac:PPA0189 conserved protein containing FHA domain.
 
 
 
 0.923
Noca_1281
PFAM: peptidase C11, clostripain; KEGG: mac:MA4003 clostripain.
   
 
 0.845
Noca_3940
PFAM: RDD domain containing protein; KEGG: lxx:Lxx12090 hypothetical protein.
   
 
 0.845
Noca_3941
PFAM: Forkhead-associated protein; KEGG: lxx:Lxx04220 hypothetical protein.
   
 
 0.845
Noca_2443
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
  
 0.760
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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