STRINGSTRING
Noca_3087 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3087" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3087Hypothetical protein (461 aa)    
Predicted Functional Partners:
Noca_3701
Hypothetical protein (167 aa)
   
          0.615
Noca_2809
HNH endonuclease (255 aa)
   
          0.546
Noca_1280
HNH nuclease (414 aa)
   
          0.530
Noca_1463
HNH nuclease (414 aa)
   
          0.529
Noca_1741
HNH nuclease (414 aa)
   
          0.515
Noca_3086
Protein kinase (658 aa)
              0.487
Noca_3088
Hypothetical protein (153 aa)
              0.441
Noca_4224
Hypothetical protein (566 aa)
   
          0.431
Noca_2116
DGPFAETKE family protein (125 aa)
   
          0.426
Noca_3815
Peptidoglycan-binding LysM (118 aa)
   
          0.415
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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