STRINGSTRING
Noca_3091 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3091" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3091Hypothetical protein (294 aa)    
Predicted Functional Partners:
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (294 aa)
   
        0.867
Noca_3034
ABC transporter-like protein (597 aa)
   
      0.645
Noca_3033
ABC transporter-like protein (602 aa)
   
      0.645
Noca_2806
ABC transporter-like protein (1185 aa)
   
      0.645
Noca_2565
ABC transporter-like protein (627 aa)
   
      0.645
Noca_1227
ABC transporter-like protein (619 aa)
   
      0.645
Noca_1226
ABC transporter (595 aa)
   
      0.645
Noca_0737
ABC transporter-like protein (652 aa)
   
      0.645
Noca_0736
ABC transporter-like protein (578 aa)
   
      0.645
Noca_3239
Phosphatidate cytidylyltransferase (308 aa)
   
      0.612
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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