Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3102KEGG: nfa:nfa6330 hypothetical protein. (294 aa)    
Predicted Functional Partners:
Noca_3103
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.
 
  
 0.819
Noca_3104
PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_3088 phospholipid/glycerol acyltransferase.
       0.781
Noca_3940
PFAM: RDD domain containing protein; KEGG: lxx:Lxx12090 hypothetical protein.
 
   
 0.651
Noca_3941
PFAM: Forkhead-associated protein; KEGG: lxx:Lxx04220 hypothetical protein.
 
   
 0.631
Noca_4290
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.555
Noca_3945
KEGG: sma:SAV3911 hypothetical protein.
  
     0.552
Noca_4183
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpa:MAP0443c hypothetical protein.
  
    0.543
Noca_1922
Hypothetical protein.
  
    0.541
Noca_3105
PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO2123 putative esterase/lipase.
       0.540
Noca_1519
KEGG: mmc:Mmcs_1412 hypothetical protein.
  
     0.539
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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