Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3103PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding. (167 aa)    
Predicted Functional Partners:
Noca_3102
KEGG: nfa:nfa6330 hypothetical protein.
 
  
 0.819
Noca_3104
PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_3088 phospholipid/glycerol acyltransferase.
     
 0.788
Noca_3369
KEGG: dra:DR0603 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domains protein.
  
     0.717
Noca_4674
PFAM: alanine racemase domain protein; KEGG: sco:SCO3903 hypothetical protein.
 
     0.710
Noca_0299
KEGG: pac:PPA2178 hypothetical protein.
  
     0.684
Noca_1714
KEGG: mpa:MAP3318c hypothetical protein.
  
     0.683
Noca_0468
KEGG: tfu:Tfu_2874 hypothetical protein.
  
     0.676
Noca_3407
TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: fra:Francci3_2878 Cob(II)yrinic acid a,c-diamide reductase.
 
 
 0.653
Noca_0518
PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sma:SAV3383 lipoprotein.
 
     0.613
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.607
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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