Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3104PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_3088 phospholipid/glycerol acyltransferase. (247 aa)    
Predicted Functional Partners:
Noca_3239
PFAM: phosphatidate cytidylyltransferase; KEGG: tfu:Tfu_0680 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.919
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: sma:SAV2680 putative glycerol-3-phosphate dehydrogenase, NAD(P)H-dependent.
  
 0.906
Noca_2655
PFAM: diacylglycerol kinase, catalytic region; KEGG: sma:SAV6694 hypothetical protein.
    
 0.905
Noca_3637
PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2593 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.815
Noca_4592
PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO0670 glycerol-3-phosphate dehydrogenase.
  
 
 0.815
Noca_3103
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.
     
 0.788
Noca_3102
KEGG: nfa:nfa6330 hypothetical protein.
       0.781
Noca_3105
PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO2123 putative esterase/lipase.
 
     0.651
Noca_3106
KEGG: sco:SCO2124 hypothetical protein.
       0.546
pyrD
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.419
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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