STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3107PFAM: LOR/SDH bifunctional enzyme conserved domain protein; KEGG: fal:FRAAL5090 hypothetical protein. (435 aa)    
Predicted Functional Partners:
Noca_3105
PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO2123 putative esterase/lipase.
       0.684
Noca_3106
KEGG: sco:SCO2124 hypothetical protein.
       0.632
Noca_3933
PFAM: ExsB family protein; Haloacid dehalogenase domain protein hydrolase; PP-loop domain protein; KEGG: ade:Adeh_1542 hypothetical protein.
 
     0.613
larC
Protein of unknown function DUF111; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
     0.597
Noca_0169
KEGG: syc:syc0382_d circadian phase modifier CpmA.
 
     0.570
Noca_3102
KEGG: nfa:nfa6330 hypothetical protein.
       0.411
Noca_3103
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.
       0.411
Noca_3104
PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_3088 phospholipid/glycerol acyltransferase.
       0.411
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.